General Multimodal Protein Design Enables DNA-Encoding of Chemistry
By Jarrid Rector-Brooks, Th\'eophile Lambert, Marta Skreta, Daniel Roth, Yueming Long, Zi-Qi Li, Xi Zhang, Miruna Cretu, Francesca-Zhoufan Li, Tanvi Ganapathy, Emily Jin, Avishek Joey Bose, Jason Yang, Kirill Neklyudov, Yoshua Bengio, Alexander Tong, Frances H. Arnold, Cheng-Hao Liu
Introduces DISCO, a multimodal diffusion model that co-designs protein sequence and 3D structure around arbitrary biomolecules, creating functional enzymes for new-to-nature reactions without pre-specifying catalytic residues. Demonstrates experimental validation of designed enzymes catalyzing carbene-transfer reactions.